fix
parent
6d13cc2a37
commit
041f602b81
10
trainer.py
10
trainer.py
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@ -645,19 +645,19 @@ class BinaryTuner:
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# expected_value = expected_value[1]
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# shap_values = explainer.shap_values(X_test)[1]
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self.logger.info("Columns: {}".format(Xbase.columns))
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# eng_columns = ['sex', 'family hist', 'age diag', 'BMI', 'base glu', 'glu 120','HbA1c']
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esp_columns = ['sexo', 'hist fam', 'edad diag', 'IMC', 'glu ayu', 'glu 120','A1c']
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# label_columns = ['sex', 'family hist', 'age diag', 'BMI', 'base glu', 'glu 120','HbA1c']
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label_columns = ['sexo', 'hist fam', 'edad diag', 'IMC', 'glu ayu', 'glu 120','A1c']
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explainer = shap.Explainer(model.predict, X_train, seed=seed)
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shap_values = explainer(X_model)
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exp = shap.Explanation(shap_values,
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data=X_model,
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feature_names=esp_columns)
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feature_names=label_columns)
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#
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# shap.plots.initjs()
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shap.plots.decision(exp.base_values[0], exp.values, features=eng_columns, show=False)
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shap.plots.decision(exp.base_values[0], exp.values, features=label_columns, show=False)
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# shap.plots.force(exp.base_values, exp.values, feature_names=Xbase.columns, show=False)
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# shap.plots.force(exp.base_values[0], exp.values[0, :], feature_names=Xbase.columns, matplotlib=True, show=False)
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# shap.plots.force(expected_values[0], shap_values.values, Xbase.columns , show=False)
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@ -671,7 +671,7 @@ class BinaryTuner:
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exp = shap.Explanation(shap_values,
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data=X_explain,
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feature_names=eng_columns)
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feature_names=label_columns)
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for i in range(5):
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shap.plots.waterfall(exp[i], show=False)
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